Stem-loop ssa-let-7a-2

Accession

MI0026742

Description

Salmo salar ssa-let-7a-2 precursor miRNA

Literature search

2 open access papers mention ssa-let-7a-2
(6 sentences)

Sequence

UGAGGUAGUAGGUUGUAUAGUUgagaauuacaccccgggagauaaCUGUACAGCCUCCUAGCUUUCC
.(((.(((.((((((((((((((...................)))))))))))))).))).)))...

Structure

--U   G   U              agaauuac 
   GAG UAG AGGUUGUAUAGUUg        a
   ||| ||| ||||||||||||||        c
   UUC AUC UCCGACAUGUCaau        c
CCU   G   C              agagggcc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-let-7a-5p

• Accession: MIMAT0032688
• Description: Salmo salar ssa-let-7a-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-let-7a-3p

• Accession: MIMAT0032689
• Description: Salmo salar ssa-let-7a-3p mature miRNA
• Sequence: 46 - CUGUACAGCCUCCUAGCUUUCC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482