Stem-loop ssa-let-7a-4

Accession

MI0026743

Description

Salmo salar ssa-let-7a-4 precursor miRNA

Literature search

2 open access papers mention ssa-let-7a-4
(6 sentences)

Sequence

UGAGGUAGUAGGUUGUAUAGUUugugggagggauuuaauccuauucaggugauaaCUAUACAGUCUAUUGCCUUCCU
.((((((((((((((((((((((.((((.(((((...))))).)))).)....)))))))))))))))))))))...

Structure

--U                     ---- g    a     u 
   GAGGUAGUAGGUUGUAUAGUU    u uggg gggau  
   |||||||||||||||||||||    | |||| ||||| u
   UUCCGUUAUCUGACAUAUCaa    g acuu uccua  
UCC                     uagu g    a     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-let-7a-5p

• Accession: MIMAT0032688
• Description: Salmo salar ssa-let-7a-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-let-7a-4-3p

• Accession: MIMAT0032691
• Description: Salmo salar ssa-let-7a-4-3p mature miRNA
• Sequence: 56 - CUAUACAGUCUAUUGCCUUCCU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482