Stem-loop ssa-mir-7a-1

Accession

MI0026745

Description

Salmo salar ssa-mir-7a-1 precursor miRNA

Sequence

UGGAAGACUAGUGAUUUUGUUGUuaugugucaaaauugaCAACAAGUCAUGGUCUACCUCA
.((.((((((.((((((.(((((((..(.....)..))))))))))))))))))).))...

Structure

--U  A      G      U       ug g 
   GG AGACUA UGAUUU GUUGUua  u u
   || |||||| |||||| |||||||  | c
   CC UCUGGU ACUGAA CAACagu  a a
ACU  A      -      -       ua a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-7a-5p

• Accession: MIMAT0032693
• Description: Salmo salar ssa-miR-7a-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-7a-1-3p

• Accession: MIMAT0032694
• Description: Salmo salar ssa-miR-7a-1-3p mature miRNA
• Sequence: 40 - CAACAAGUCAUGGUCUACCUCA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482