Stem-loop ssa-mir-7a-7

Accession

MI0026751

Description

Salmo salar ssa-mir-7a-7 precursor miRNA

Sequence

UGGAAGACUAGUGAUUUUGUUGUuguaaauuuagcucacugaCAACAAGUCACAGUCUACCUC
.((.(((((.(((((((.((((((((...........)).)))))))))))))))))).))..

Structure

-U  A     A       U      -  aaau 
  GG AGACU GUGAUUU GUUGUu gu    u
  || ||||| ||||||| |||||| ||    u
  CC UCUGA CACUGAA CAACag ca    a
CU  A     -       -      u  cucg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-7a-5p

• Accession: MIMAT0032693
• Description: Salmo salar ssa-miR-7a-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-7a-7-3p

• Accession: MIMAT0032700
• Description: Salmo salar ssa-miR-7a-7-3p mature miRNA
• Sequence: 43 - CAACAAGUCACAGUCUACCUC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482