Stem-loop ssa-mir-92a-4

Accession

MI0026761

Description

Salmo salar ssa-mir-92a-4 precursor miRNA

Literature search

3 open access papers mention ssa-mir-92a-4
(5 sentences)

Sequence

AGGUUGGGAGGGGUGUCAGUGCUguuacucugaaggUAUUGCACUUGUCCCGGCCUGU
(((((((((.(((((.(((((((.(((...))).)))))))))))).)))))))))..

Structure

--         G     U       g   c 
  AGGUUGGGA GGGUG CAGUGCU uua  
  ||||||||| ||||| ||||||| ||| u
  UCCGGCCCU UUCAC GUUAUgg agu  
UG         G     -       a   c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-92a-3p

• Accession: MIMAT0032708
• Description: Salmo salar ssa-miR-92a-3p mature miRNA
• Sequence: 37 - UAUUGCACUUGUCCCGGCCUGU - 58
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-92a-4-5p

• Accession: MIMAT0032710
• Description: Salmo salar ssa-miR-92a-4-5p mature miRNA
• Sequence: 1 - AGGUUGGGAGGGGUGUCAGUGCU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482