Stem-loop ssa-mir-99-2

Accession

MI0026768

Description

Salmo salar ssa-mir-99-2 precursor miRNA

Literature search

2 open access papers mention ssa-mir-99-2
(4 sentences)

Sequence

AACCCGUAGAUCCGAUCUUGUGgcgaaucugacaucaCAAGCUCGCCUCUGUGGGCCUCU
..((((((((..(((.(((((((.(.......).))))))).)))..)))))))).....

Structure

---AA        UC   U       c aa 
     CCCGUAGA  CGA CUUGUGg g  u
     ||||||||  ||| ||||||| |  c
     GGGUGUCU  GCU GAACacu c  u
UCUCC        CC   C       a ag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-99-5p

• Accession: MIMAT0032718
• Description: Salmo salar ssa-miR-99-5p mature miRNA
• Sequence: 1 - AACCCGUAGAUCCGAUCUUGUG - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-99-2-3p

• Accession: MIMAT0032720
• Description: Salmo salar ssa-miR-99-2-3p mature miRNA
• Sequence: 38 - CAAGCUCGCCUCUGUGGGCCUCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482