Stem-loop ssa-mir-9a-2

Accession

MI0026770

Description

Salmo salar ssa-mir-9a-2 precursor miRNA

Sequence

17115 reads, 113.0 reads per million, 87 experiments

UCUUUGGUUAUCUAGCUGUAUGAgugugauggccgucAUAAAGCUAGAUAACCGAAAGUA
..(((((((((((((((.(((((..((....))..))))).)))))))))))))))....

Structure

--UC               G     gu  g 
    UUUGGUUAUCUAGCU UAUGA  gu a
    ||||||||||||||| |||||  ||  
    AAGCCAAUAGAUCGA AUAcu  cg u
AUGA               A     gc  g 

Annotation confidence High

Genome context

Unknown

Mature ssa-miR-9a-5p

• Accession: MIMAT0032721
• Description: Salmo salar ssa-miR-9a-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-9a-2-3p

• Accession: MIMAT0032723
• Description: Salmo salar ssa-miR-9a-2-3p mature miRNA
• Sequence: 38 - AUAAAGCUAGAUAACCGAAAGUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482