Stem-loop ssa-mir-9b

Accession

MI0026777

Description

Salmo salar ssa-mir-9b precursor miRNA

Sequence

1595 reads, 8.0 reads per million, 87 experiments

UCUUUGGUUAUCUAGCUGAAUGAguuuaugugauaucaUAAAGCUAGAGAACCGAAUGUA
..(((((((.(((((((..((((..((....))..))))..))))))).)))))))....

Structure

--UC       A       GA    gu  a 
    UUUGGUU UCUAGCU  AUGA  uu u
    ||||||| |||||||  ||||  ||  
    AAGCCAA AGAUCGA  Uacu  ag g
AUGU       G       AA    au  u 

Annotation confidence High

Genome context

Unknown

Mature ssa-miR-9b-5p

• Accession: MIMAT0032730
• Description: Salmo salar ssa-miR-9b-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGAAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-9b-3p

• Accession: MIMAT0032731
• Description: Salmo salar ssa-miR-9b-3p mature miRNA
• Sequence: 39 - UAAAGCUAGAGAACCGAAUGUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482