Stem-loop ssa-mir-8157

Accession

MI0026780

Description

Salmo salar ssa-mir-8157 precursor miRNA

Literature search

1 open access papers mention ssa-mir-8157
(5 sentences)

Sequence

UAGCACAUUACAGUACAGCUGUauuguuacugcacuguACUCUGUGCUCUGCUGUGCUGU
(((((((.((.(((((((..(((((((....)))..)))).))))))).)).))))))).

Structure

-       U  C       CU    --   u 
 UAGCACA UA AGUACAG  GUau  ugu a
 ||||||| || |||||||  ||||  |||  
 GUCGUGU GU UCGUGUC  CAug  acg c
U       C  C       -U    uc   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-8157-5p

• Accession: MIMAT0032736
• Description: Salmo salar ssa-miR-8157-5p mature miRNA
• Sequence: 1 - UAGCACAUUACAGUACAGCUGU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-8157-3p

• Accession: MIMAT0032737
• Description: Salmo salar ssa-miR-8157-3p mature miRNA
• Sequence: 39 - ACUCUGUGCUCUGCUGUGCUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482