Stem-loop ssa-mir-734

Accession

MI0026781

Description

Salmo salar ssa-mir-734 precursor miRNA

Literature search

1 open access papers mention ssa-mir-734
(10 sentences)

Sequence

uGAACUAUUCUGCAACAUUUGUUgaugugguucugcuagUAAAUGCUGCAGAAUUGUGCUU
...((.((((((((.(((((((.((......)).))....))))).)))))))).))....

Structure

-uGA  U        A     ----  U  ug 
    AC AUUCUGCA CAUUU    GU ga  u
    || |||||||| |||||    || ||   
    UG UAAGACGU GUAAA    cg cu  g
UUCG  U        C     Ugau  u  ug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-734-5p

• Accession: MIMAT0032738
• Description: Salmo salar ssa-miR-734-5p mature miRNA
• Sequence: 2 - GAACUAUUCUGCAACAUUUGUU - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-734-3p

• Accession: MIMAT0032739
• Description: Salmo salar ssa-miR-734-3p mature miRNA
• Sequence: 40 - UAAAUGCUGCAGAAUUGUGCUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482