Stem-loop ssa-mir-8159

Accession

MI0026783

Description

Salmo salar ssa-mir-8159 precursor miRNA

Sequence

UCAGUAACUGGAAUCUGUCCCUGCagacacacuguagagcAGGGCCGGCUGGUUACUGCGC
.((((((((((...(((.((((((..(((...)))...)))))).)))))))))))))...

Structure

--U          AAU   U      -ag   c 
   CAGUAACUGG   CUG CCCUGC   aca  
   ||||||||||   ||| ||||||   ||| a
   GUCAUUGGUC   GGC GGGAcg   ugu  
CGC          ---   C      aga   c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-8159-5p

• Accession: MIMAT0032742
• Description: Salmo salar ssa-miR-8159-5p mature miRNA
• Sequence: 1 - UCAGUAACUGGAAUCUGUCCCUGC - 24
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-8159-3p

• Accession: MIMAT0032743
• Description: Salmo salar ssa-miR-8159-3p mature miRNA
• Sequence: 41 - AGGGCCGGCUGGUUACUGCGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482