Stem-loop ssa-mir-8160-1

Accession

MI0026785

Description

Salmo salar ssa-mir-8160-1 precursor miRNA

Sequence

AGAAUAAUGCCAGCAGUCGGCCcugguuuccuaggggCCAGCACUGGUGUUAUUGGGA
..(((((((((((..((.((((((((....))).))))).)).)))))))))))....

Structure

--AG           CA  C     -   u 
    AAUAAUGCCAG  GU GGCCc ugg u
    |||||||||||  || ||||| |||  
    UUAUUGUGGUC  CG CCggg auc u
AGGG           -A  A     g   c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-8160-5p

• Accession: MIMAT0032746
• Description: Salmo salar ssa-miR-8160-5p mature miRNA
• Sequence: 1 - AGAAUAAUGCCAGCAGUCGGCC - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-8160-3p

• Accession: MIMAT0032747
• Description: Salmo salar ssa-miR-8160-3p mature miRNA
• Sequence: 38 - CCAGCACUGGUGUUAUUGGGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482