Stem-loop ssa-mir-7552a-1

Accession

MI0026788

Description

Salmo salar ssa-mir-7552a-1 precursor miRNA

Literature search

1 open access papers mention ssa-mir-7552a-1
(1 sentences)

Sequence

UUACAAUUAAAGGAUAUUUCUUgcgaaugaaugagagacggAAAUGUCCCUUAAUUGUUUGGC
..((((((((.((((((((((..(............)..)))))))))).)))))))).....

Structure

---UU        A          Ug gaaug 
     ACAAUUAA GGAUAUUUCU  c     a
     |||||||| ||||||||||  |      
     UGUUAAUU CCUGUAAAgg  g     a
CGGUU        C          ca agagu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-7552a-5p

• Accession: MIMAT0032752
• Description: Salmo salar ssa-miR-7552a-5p mature miRNA
• Sequence: 1 - UUACAAUUAAAGGAUAUUUCUU - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-7552a-3p

• Accession: MIMAT0032753
• Description: Salmo salar ssa-miR-7552a-3p mature miRNA
• Sequence: 42 - AAAUGUCCCUUAAUUGUUUGGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482