Stem-loop ssa-mir-8162

Accession

MI0026790

Description

Salmo salar ssa-mir-8162 precursor miRNA

Sequence

UUGUCUCAGACCUGUUUGUGCUGuaguuguuaucaggaugUCACAACGGAUCUGGGAUCAGU
..((((((((.(((((.(((.(((..(((....))).))).)))))))).))))))))....

Structure

--UU        C     U   C   ag   u 
    GUCUCAGA CUGUU GUG UGu  uug u
    |||||||| ||||| ||| |||  |||  
    UAGGGUCU GGCAA CAC gua  gac a
UGAC        A     -   U   -g   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-8162-5p

• Accession: MIMAT0032755
• Description: Salmo salar ssa-miR-8162-5p mature miRNA
• Sequence: 1 - UUGUCUCAGACCUGUUUGUGCUG - 23
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-8162-3p

• Accession: MIMAT0032756
• Description: Salmo salar ssa-miR-8162-3p mature miRNA
• Sequence: 41 - UCACAACGGAUCUGGGAUCAGU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482