Stem-loop ssa-mir-8164

Accession

MI0026792

Description

Salmo salar ssa-mir-8164 precursor miRNA

Literature search

1 open access papers mention ssa-mir-8164
(1 sentences)

Sequence

CAGAGGUAUUGUAAUAUCGUGAuacuacaauacucaccACGAUACGGCGAUAAUUCUGAU
(((((.((((((..(((((((................)))))))..)))))).)))))..

Structure

--     G      AA       Auacuac 
  CAGAG UAUUGU  UAUCGUG       a
  ||||| ||||||  |||||||        
  GUCUU AUAGCG  AUAGCAc       a
UA     A      GC       cacucau 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-8164-5p

• Accession: MIMAT0032759
• Description: Salmo salar ssa-miR-8164-5p mature miRNA
• Sequence: 1 - CAGAGGUAUUGUAAUAUCGUGA - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-8164-3p

• Accession: MIMAT0032760
• Description: Salmo salar ssa-miR-8164-3p mature miRNA
• Sequence: 39 - ACGAUACGGCGAUAAUUCUGAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482