Stem-loop sja-mir-8185

Accession

MI0026815

Description

Schistosoma japonicum sja-mir-8185 precursor miRNA

Literature search

1 open access papers mention sja-mir-8185
(3 sentences)

Sequence

cggauaugcugcugcuccuucagcugaugucucauagaaucuaguggcagguggAGGAUCGAUGAACGGAGCAUUaggaugcacu
.(..(((.(((.((((((((((..((((.((((......((....))......)))))))).)))).)))))).))).)))..).

Structure

c ga   g   c      -    gc    g    auagaa  u 
 g  uau cug ugcucc uuca  ugau ucuc      uc a
 |  ||| ||| |||||| ||||  |||| ||||      ||  
 c  gua gaU ACGAGG AAGU  GCUA GGAg      gg g
u ac   g   U      C    -A    -    guggac  u 

Annotation confidence Not enough data

Genome context

CABF01050135.1: 8914-8998 [-]

Mature sja-miR-8185

• Accession: MIMAT0032784
• Description: Schistosoma japonicum sja-miR-8185 mature miRNA
• Sequence: 55 - AGGAUCGAUGAACGGAGCAUU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23942009
   Deep sequencing-based identification of pathogen-specific microRNAs in the plasma of rabbits infected with Schistosoma japonicum
   "Cheng G, Luo R, Hu C, Cao J, Jin Y"
   "Parasitology (2013) 140:1751-1761