miRBase entry: cel-mir-8195

Stem-loop cel-mir-8195


Accession
MI0026826
Description
Caenorhabditis elegans cel-mir-8195 precursor miRNA


Sequence

1574 reads, 58.0 reads per million, 67 experiments
gucGAGCUGUCCGUACUCGUCGAcuauaaccgacgccaaguaGAGGUACGAGCUGUGACGG
((((((((((((.(((((((((........)))))...))))..)).)).)))).))))..

Structure
--    -    -  -  -G    ---     Acu 
  gucG AGCU GU CC  UACU   CGUCG   a
  |||| |||| || ||  ||||   |||||    
  CAGU UCGA CA GG  auga   gcagc   u
GG    G    G  U  AG    acc     caa 


Annotation confidence Low
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Genome context
chrII: 2464028-2464088 [+]

Database links

Mature cel-miR-8195-5p

Accession MIMAT0032803
Description Caenorhabditis elegans cel-miR-8195-5p mature miRNA
Sequence 4 - GAGCUGUCCGUACUCGUCGA - 23
Evidence experimental
Illumina [1]

Mature cel-miR-8195-3p

Accession MIMAT0032804
Description Caenorhabditis elegans cel-miR-8195-3p mature miRNA
Sequence 43 - GAGGUACGAGCUGUGACGG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23729632
    Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
    "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
    "Genome Biol Evol (2013) 5:1246-1260