Stem-loop cel-mir-8196a

Accession

MI0026827

Description

Caenorhabditis elegans cel-mir-8196a precursor miRNA

Sequence

13482 reads, 53.0 reads per million, 86 experiments

ccccauagaaauaUUUUCUAUGUCAACCUCUUGCACGguugcCGUAGUUAAUUUUUCUUUGGGAAu
.((((.(((((.(((..(((((.(((((........))))).)))))..))).))))).))))...

Structure

--c    u     u   UU     U     UCU 
   ccca agaaa aUU  CUAUG CAACC   U
   |||| ||||| |||  ||||| |||||    
   GGGU UCUUU UAA  GAUGC guugG   G
uAA    U     U   UU     c     CAC 

Annotation confidence Low

Genome context

chrX: 2329038-2329103 [+]

Mature cel-miR-8196a-5p

• Accession: MIMAT0032805
• Description: Caenorhabditis elegans cel-miR-8196a-5p mature miRNA
• Sequence: 14 - UUUUCUAUGUCAACCUCUUGCACG - 37
• Evidence: experimental ; Illumina [1]

Mature cel-miR-8196a-3p

• Accession: MIMAT0032806
• Description: Caenorhabditis elegans cel-miR-8196a-3p mature miRNA
• Sequence: 43 - CGUAGUUAAUUUUUCUUUGGGAA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260