Stem-loop cel-mir-8198

Accession

MI0026829

Description

Caenorhabditis elegans cel-mir-8198 precursor miRNA

Sequence

11816 reads, 120 reads per million, 16 experiments

UUGAACAGUUUCAAUUUGUUuuuaaauuguucuacaacaauuuuuaagaauUAAUUACGGAUACUGUUCAAA
(((((((((.((((((.((((((((((((((....))))))..)))))))).))))...)).))))))))).

Structure

-         U  ---    U        --      c 
 UUGAACAGU UC   AAUU GUUuuuaa  auuguu u
 ||||||||| ||   |||| ||||||||  ||||||  
 AACUUGUCA AG   UUAA uaagaauu  uaacaa a
A         U  GCA    U        uu      c 

Annotation confidence Not enough data

Genome context

chrIV: 16214390-16214461 [-]

Mature cel-miR-8198-5p

• Accession: MIMAT0032809
• Description: Caenorhabditis elegans cel-miR-8198-5p mature miRNA
• Sequence: 1 - UUGAACAGUUUCAAUUUGUU - 20
• Evidence: experimental ; Illumina [1]

Mature cel-miR-8198-3p

• Accession: MIMAT0032810
• Description: Caenorhabditis elegans cel-miR-8198-3p mature miRNA
• Sequence: 52 - UAAUUACGGAUACUGUUCAAA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260