Stem-loop cel-mir-8200

Accession

MI0026831

Description

Caenorhabditis elegans cel-mir-8200 precursor miRNA

Sequence

41 reads, 7 reads per million, 5 experiments

UGGCUCAAAUCUCCAGUCAGACCcugaugugggUCUGACGGGAGAUUUGAGCCAUC
((((((((((((((.(((((((((......))))))))).))))))))))))))..

Structure

--              A         ug 
  UGGCUCAAAUCUCC GUCAGACCc  a
  |||||||||||||| |||||||||   
  ACCGAGUUUAGAGG CAGUCUggg  u
CU              G         ug 

Annotation confidence Not enough data

Genome context

chrV: 3057062-3057117 [+]

Mature cel-miR-8200-5p

• Accession: MIMAT0032813
• Description: Caenorhabditis elegans cel-miR-8200-5p mature miRNA
• Sequence: 1 - UGGCUCAAAUCUCCAGUCAGACC - 23
• Evidence: experimental ; Illumina [1]

Mature cel-miR-8200-3p

• Accession: MIMAT0032814
• Description: Caenorhabditis elegans cel-miR-8200-3p mature miRNA
• Sequence: 34 - UCUGACGGGAGAUUUGAGCCAUC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260