Stem-loop cel-mir-4810b

Accession

MI0026835

Description

Caenorhabditis elegans cel-mir-4810b precursor miRNA

Sequence

19 reads, 2 reads per million, 8 experiments

GUAGGUUCAUGAGUAGUCAUAUagguauauuguacguaUGACUAUCUCAUCAACUUACAG
(((((((.((((((((((((((..((((...))))))))))))).))))).)))))))..

Structure

--       C     -         ag    a 
  GUAGGUU AUGAG UAGUCAUAU  guau  
  ||||||| ||||| |||||||||  |||| u
  CAUUCAA UACUC AUCAGUaug  caug  
GA       C     U         --    u 

Annotation confidence Not enough data

Genome context

chrX: 1874016-1874075 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from cel-mir-4810b

Mature cel-miR-4810b-5p

• Accession: MIMAT0032821
• Description: Caenorhabditis elegans cel-miR-4810b-5p mature miRNA
• Sequence: 1 - GUAGGUUCAUGAGUAGUCAUAU - 22
• Evidence: experimental ; Illumina [1]

Mature cel-miR-4810b-3p

• Accession: MIMAT0032822
• Description: Caenorhabditis elegans cel-miR-4810b-3p mature miRNA
• Sequence: 39 - UGACUAUCUCAUCAACUUACAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260