Stem-loop cel-mir-8196b

Accession

MI0026837

Description

Caenorhabditis elegans cel-mir-8196b precursor miRNA

Sequence

1761 reads, 18.0 reads per million, 74 experiments

cccauagaaauAUUUUCUAUGUCAACCUCUuguacgguugcUGUAGUUAAUUUUUUCUUUGGGAA
((((.(((((.(((..(((((.(((((........))))).)))))..)))..))))).))))..

Structure

--    u     -u   UU     U     UCU 
  ccca agaaa  AUU  CUAUG CAACC   u
  |||| |||||  |||  ||||| |||||    
  GGGU UCUUU  UAA  GAUGU guugg   g
AA    U     UU   UU     c     cau 

Annotation confidence Low

Genome context

chrX: 14324406-14324470 [-]

Mature cel-miR-8196b-5p

• Accession: MIMAT0032825
• Description: Caenorhabditis elegans cel-miR-8196b-5p mature miRNA
• Sequence: 12 - AUUUUCUAUGUCAACCUCU - 30
• Evidence: experimental ; Illumina [1]

Mature cel-miR-8196b-3p

• Accession: MIMAT0032826
• Description: Caenorhabditis elegans cel-miR-8196b-3p mature miRNA
• Sequence: 42 - UGUAGUUAAUUUUUUCUUUGGGAA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260