Stem-loop cel-mir-2217b-1

Accession

MI0026844

Description

Caenorhabditis elegans cel-mir-2217b-1 precursor miRNA

Sequence

52 reads, 1 reads per million, 10 experiments

CAGAGCGGGCAGUCGGUGUCAAUCugcaacaauagcaggUUGACCCUUGUGCUUGUUUCGGC
..(((((((((...((.((((((((((.......))))))))))))...)))))))))....

Structure

--CA         GUC  U          aa 
    GAGCGGGCA   GG GUCAAUCugc  c
    |||||||||   || ||||||||||  a
    UUUGUUCGU   CC CAGUUggacg  a
CGGC         GUU  -          au 

Annotation confidence Not enough data

Genome context

chrX: 17608227-17608288 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cel-mir-2217b-1

Mature cel-miR-2217b-1-5p

• Accession: MIMAT0032839
• Description: Caenorhabditis elegans cel-miR-2217b-1-5p mature miRNA
• Sequence: 1 - CAGAGCGGGCAGUCGGUGUCAAUC - 24
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2217b-3p

• Accession: MIMAT0032840
• Description: Caenorhabditis elegans cel-miR-2217b-3p mature miRNA
• Sequence: 40 - UUGACCCUUGUGCUUGUUUCGGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260