Stem-loop cel-mir-2217b-3

Accession

MI0026846

Description

Caenorhabditis elegans cel-mir-2217b-3 precursor miRNA

Sequence

517 reads, 2.0 reads per million, 66 experiments

cAGAGUGGGCAGUCGGUGUCaaucugcaacaauagcaggUUGACCCUUGUGCUUGUUUCGGc
..(((.(((((...((.((((((((((.......))))))))))))...)))))..)))...

Structure

-cA   -U     GUC  U          aa 
   GAG  GGGCA   GG GUCaaucugc  c
   |||  |||||   || ||||||||||  a
   CUU  UUCGU   CC CAGUUggacg  a
cGG   UG     GUU  -          au 

Annotation confidence Medium

Genome context

chrIV: 14452441-14452502 [-]

Mature cel-miR-2217b-5p

• Accession: MIMAT0032841
• Description: Caenorhabditis elegans cel-miR-2217b-5p mature miRNA
• Sequence: 2 - AGAGUGGGCAGUCGGUGUC - 20
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2217b-3p

• Accession: MIMAT0032840
• Description: Caenorhabditis elegans cel-miR-2217b-3p mature miRNA
• Sequence: 40 - UUGACCCUUGUGCUUGUUUCGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260