Stem-loop cel-mir-2217b-4

Accession

MI0026849

Description

Caenorhabditis elegans cel-mir-2217b-4 precursor miRNA

Sequence

49 reads, 1 reads per million, 10 experiments

CAGAGUGGGCAGUCGGUGUCAAUCugcaacaauagcaggUUGACCCUUGUGCUUGUUUCGGC
..(((.(((((...((.((((((((((.......))))))))))))...)))))..)))...

Structure

-CA   -U     GUC  U          aa 
   GAG  GGGCA   GG GUCAAUCugc  c
   |||  |||||   || ||||||||||  a
   CUU  UUCGU   CC CAGUUggacg  a
CGG   UG     GUU  -          au 

Annotation confidence Not enough data

Genome context

chrIV: 15799052-15799113 [-]

Mature cel-miR-2217b-3p

• Accession: MIMAT0032840
• Description: Caenorhabditis elegans cel-miR-2217b-3p mature miRNA
• Sequence: 40 - UUGACCCUUGUGCUUGUUUCGGC - 62
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2217b-5p

• Accession: MIMAT0032841
• Description: Caenorhabditis elegans cel-miR-2217b-5p mature miRNA
• Sequence: 1 - CAGAGUGGGCAGUCGGUGUCAAUC - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260