Accession
MI0026864
Description
Pristionchus pacificus
ppc-mir-8220 precursor miRNA
Sequence
AGGCGCUUGCCAGCUUUAUCCgcauugcaaucaaugaggcaggCUAAAGCUCGGCUAACGCCUCU
(((((...((((((((((.((((((((....))))...)).)).))))))).)))...)))))..
(((((...((((((((((.((((((((....))))...)).)).))))))).)))...)))))..
Structure
-- CUU - U - --- c AGGCG GCC AGCUUUA CC gc auug a ||||| ||| ||||||| || || |||| UCCGC CGG UCGAAAU gg cg uaac a UC AAU C C a gag u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ABKE03000131.1: 535946-536010 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from ppc-mir-8220
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-8220-5p
| Accession | MIMAT0032874 |
| Description | Pristionchus pacificus ppc-miR-8220-5p mature miRNA |
| Sequence | 1 - AGGCGCUUGCCAGCUUUAUCC - 21 |
| Evidence |
experimental
Illumina [1], SOLiD [1] |
Mature ppc-miR-8220-3p
| Accession | MIMAT0032875 |
| Description | Pristionchus pacificus ppc-miR-8220-3p mature miRNA |
| Sequence | 44 - CUAAAGCUCGGCUAACGCCUCU - 65 |
| Evidence |
experimental
Illumina [1], SOLiD [1] |
References
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