Stem-loop ppc-mir-8364d

Accession

MI0026882

Description

Pristionchus pacificus ppc-mir-8364d precursor miRNA

Sequence

CACUUCAUUUCACCUAUUCUCUcgccauucgaccgaacgaGAGAGUGCGUGAAAUGAAGAGA
..(((((((((((.((((((((((...(((....))))))))))))).)))))))))))...

Structure

-CA           C          cca   g 
   CUUCAUUUCAC UAUUCUCUcg   uuc a
   ||||||||||| ||||||||||   |||  
   GAAGUAAAGUG GUGAGAGagc   aag c
AGA           C          ---   c 

Annotation confidence Low

Genome context

ABKE03000093.1: 5232954-5233015 [+]

Mature ppc-miR-8364d-5p

• Accession: MIMAT0032910
• Description: Pristionchus pacificus ppc-miR-8364d-5p mature miRNA
• Sequence: 1 - CACUUCAUUUCACCUAUUCUCU - 22
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8364d-3p

• Accession: MIMAT0032911
• Description: Pristionchus pacificus ppc-miR-8364d-3p mature miRNA
• Sequence: 41 - GAGAGUGCGUGAAAUGAAGAGA - 62
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260