Stem-loop ppc-mir-8233

Accession

MI0026886

Description

Pristionchus pacificus ppc-mir-8233 precursor miRNA

Sequence

AGGGUUGUCGUACCUCGUGUUCAucuuaaucucaauaguugAACCCGAGGCGACGACUCUUU
((((((((((..(((((.(((((.((..........)).))))).)))))))))))))))..

Structure

--          UA     U     u  uaau 
  AGGGUUGUCG  CCUCG GUUCA cu    c
  ||||||||||  ||||| ||||| ||     
  UCUCAGCAGC  GGAGC CAAgu ga    u
UU          --     C     u  uaac 

Annotation confidence Low

Genome context

ABKE03000001.1: 19702-19763 [+]

Mature ppc-miR-8233-5p

• Accession: MIMAT0032918
• Description: Pristionchus pacificus ppc-miR-8233-5p mature miRNA
• Sequence: 1 - AGGGUUGUCGUACCUCGUGUUCA - 23
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8233-3p

• Accession: MIMAT0032919
• Description: Pristionchus pacificus ppc-miR-8233-3p mature miRNA
• Sequence: 42 - AACCCGAGGCGACGACUCUUU - 62
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260