Accession
MI0026902
Description
Pristionchus pacificus
ppc-mir-2235c precursor miRNA
Sequence
CCACCCAGUCCGCUCGGUCUGAACcauucccgaaaguguguUCACCGGGAGUAUUGCGUGAUC
.(((.((((.(.((((((..((((((((......)))).)))))))))).).)))).)))...
.(((.((((.(.((((((..((((((((......)))).)))))))))).).)))).)))...
Structure
--C C C G CU - cc CAC CAGU C CUCGGU GAAC cauu c ||| |||| | |||||| |||| |||| GUG GUUA G GGGCCA CUug guga g CUA C U A -- u aa
Annotation confidence
Low
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Genome context
ABKE03000123.1: 3623214-3623276 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ppc-mir-2235c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-2235c-5p
| Accession | MIMAT0032950 |
| Description | Pristionchus pacificus ppc-miR-2235c-5p mature miRNA |
| Sequence | 1 - CCACCCAGUCCGCUCGGUCUGAAC - 24 |
| Evidence |
experimental
Illumina [1], SOLiD [1] |
Mature ppc-miR-2235c-3p
| Accession | MIMAT0032951 |
| Description | Pristionchus pacificus ppc-miR-2235c-3p mature miRNA |
| Sequence | 42 - UCACCGGGAGUAUUGCGUGAUC - 63 |
| Evidence |
experimental
Illumina [1], SOLiD [1] |
References
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