Accession
MI0026904
Description
Pristionchus pacificus
ppc-mir-8245a precursor miRNA
Sequence
631
reads,
40.0
reads per million, 11 experiments
CGAUAGCUGUCGGUAAUGUAGUUggcauugaaggaacUACAUGUACCGUCAGUCGUCAGA
.(((.((((.(((((((((((((...........)))))))).))))).)))).)))...
.(((.((((.(((((((((((((...........)))))))).))))).)))).)))...
Structure
--C A U - ggca GAU GCUG CGGUA AUGUAGUU u ||| |||| ||||| |||||||| u CUG UGAC GCCAU UACAUcaa g AGA C U G ggaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ABKE03000092.1: 2478441-2478500 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppc-mir-8245a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-8245a-5p
| Accession | MIMAT0032954 |
| Description | Pristionchus pacificus ppc-miR-8245a-5p mature miRNA |
| Sequence | 1 - CGAUAGCUGUCGGUAAUGUAGUU - 23 |
| Evidence |
experimental
Illumina [1], SOLiD [1] |
Mature ppc-miR-8245a-3p
| Accession | MIMAT0032955 |
| Description | Pristionchus pacificus ppc-miR-8245a-3p mature miRNA |
| Sequence | 38 - UACAUGUACCGUCAGUCGUCAGA - 60 |
| Evidence |
experimental
Illumina [1], SOLiD [1] |
References
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