Stem-loop ppc-mir-8246

Accession

MI0026905

Description

Pristionchus pacificus ppc-mir-8246 precursor miRNA

Sequence

CAUUGACUUCUCGUGACCAUUCAuuugaucgaauuaugAAUGGUGCGAUCUAGUCGAAGCG
..((((((..((((.(((((((((...........)))))))))))))...))))))....

Structure

--CA      -UC    G         uuga 
    UUGACU   UCGU ACCAUUCAu    u
    ||||||   |||| |||||||||    c
    AGCUGA   AGCG UGGUAAgua    g
GCGA      UCU    -         uuaa 

Annotation confidence Low

Genome context

ABKE03000123.1: 8706260-8706320 [+]

Mature ppc-miR-8246-5p

• Accession: MIMAT0032956
• Description: Pristionchus pacificus ppc-miR-8246-5p mature miRNA
• Sequence: 1 - CAUUGACUUCUCGUGACCAUUCA - 23
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8246-3p

• Accession: MIMAT0032957
• Description: Pristionchus pacificus ppc-miR-8246-3p mature miRNA
• Sequence: 39 - AAUGGUGCGAUCUAGUCGAAGCG - 61
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260