Stem-loop ppc-mir-8251

Accession

MI0026911

Description

Pristionchus pacificus ppc-mir-8251 precursor miRNA

Sequence

CACCGGUUUCCGUGAGCGCACUgugauguugaagcaagUGCCUCGCGCGCAAACCGGAGC
..((((((((((((((.(((((((.........)).))))))))))).).)))))))...

Structure

-CA       - -      C     -  gau 
   CCGGUUU C CGUGAG GCACU gu   g
   ||||||| | |||||| ||||| ||   u
   GGCCAAA G GCGCUC CGUga cg   u
CGA       C C      -     a  aag 

Annotation confidence Not enough data

Genome context

ABKE03000100.1: 328192-328251 [+]

Mature ppc-miR-8251-5p

• Accession: MIMAT0032968
• Description: Pristionchus pacificus ppc-miR-8251-5p mature miRNA
• Sequence: 1 - CACCGGUUUCCGUGAGCGCACU - 22
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8251-3p

• Accession: MIMAT0032969
• Description: Pristionchus pacificus ppc-miR-8251-3p mature miRNA
• Sequence: 39 - UGCCUCGCGCGCAAACCGGAGC - 60
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260