Stem-loop ppc-mir-8252a

Accession

MI0026913

Description

Pristionchus pacificus ppc-mir-8252a precursor miRNA

Sequence

UCGGCUACUUUCGGGCACGUGUUugcuauuuggcgaugaaCACUGCCCGCGAGUAGUUGUGG
.(((((((((.((((((.(((((((((....)))...)))))))))))).)))))))))...

Structure

--U         U      C      ---   a 
   CGGCUACUU CGGGCA GUGUUu   gcu u
   ||||||||| |||||| ||||||   |||  
   GUUGAUGAG GCCCGU CACaag   cgg u
GGU         C      -      uag   u 

Annotation confidence Low

Genome context

ABKE03000064.1: 459142-459203 [+]

Mature ppc-miR-8252a-5p

• Accession: MIMAT0032972
• Description: Pristionchus pacificus ppc-miR-8252a-5p mature miRNA
• Sequence: 1 - UCGGCUACUUUCGGGCACGUGUU - 23
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-8252a-3p

• Accession: MIMAT0032973
• Description: Pristionchus pacificus ppc-miR-8252a-3p mature miRNA
• Sequence: 41 - CACUGCCCGCGAGUAGUUGUGG - 62
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260