Stem-loop ppc-mir-2253d

Accession

MI0026929

Description

Pristionchus pacificus ppc-mir-2253d precursor miRNA

Sequence

CGGAGUUUCAACAGGCCAUACAacucgcguaugCAUGGCACUGCUGAAACUUCGAA
((((((((((.((((((((.((((....)).)).))))).))).))))))))))..

Structure

--          A   -     A  -  u 
  CGGAGUUUCA CAG GCCAU CA ac c
  |||||||||| ||| ||||| || ||  
  GCUUCAAAGU GUC CGGUA gu ug g
AA          C   A     C  a  c 

Annotation confidence Low

Genome context

ABKE03000012.1: 1088106-1088161 [+]

Mature ppc-miR-2253d-5p

• Accession: MIMAT0033003
• Description: Pristionchus pacificus ppc-miR-2253d-5p mature miRNA
• Sequence: 1 - CGGAGUUUCAACAGGCCAUACA - 22
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature ppc-miR-2253d-3p

• Accession: MIMAT0033004
• Description: Pristionchus pacificus ppc-miR-2253d-3p mature miRNA
• Sequence: 34 - CAUGGCACUGCUGAAACUUCGAA - 56
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260