Stem-loop ppc-mir-8269

Accession

MI0026940

Description

Pristionchus pacificus ppc-mir-8269 precursor miRNA

Sequence

GUGAGCAAGCAGGCGAAACAUGAaugaagcguugcuuugcucUUGAUUCAUCUGCGCGCUCAGGA
.(((((..(((((.(((.((.((.((((((...)))))).)).)).))).)))))..)))))...

Structure

--G     AA     C   A  U  a      g 
   UGAGC  GCAGG GAA CA GA ugaagc  
   |||||  ||||| ||| || || |||||| u
   ACUCG  CGUCU CUU GU cu guuucg  
AGG     CG     A   A  U  c      u 

Annotation confidence Low

Genome context

ABKE03000007.1: 194661-194725 [-]

Mature ppc-miR-8269-5p

• Accession: MIMAT0033024
• Description: Pristionchus pacificus ppc-miR-8269-5p mature miRNA
• Sequence: 1 - GUGAGCAAGCAGGCGAAACAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8269-3p

• Accession: MIMAT0033025
• Description: Pristionchus pacificus ppc-miR-8269-3p mature miRNA
• Sequence: 43 - UUGAUUCAUCUGCGCGCUCAGGA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260