Stem-loop ppc-mir-8364c-2

Accession

MI0026943

Description

Pristionchus pacificus ppc-mir-8364c-2 precursor miRNA

Sequence

UCUUCAUUUCACAUACUCUCUcaucacgggaccggccaaGAGAGUCUGUGAAAUGAAGAGA
(((((((((((((.(((((((.....((....))....))))))).)))))))))))))..

Structure

--             U       cauca  g 
  UCUUCAUUUCACA ACUCUCU     cg g
  ||||||||||||| |||||||     ||  
  AGAAGUAAAGUGU UGAGAGa     gc a
AG             C       -accg  c 

Annotation confidence Low

Genome context

ABKE03000011.1: 562963-563023 [+]

Mature ppc-miR-8364c-5p

• Accession: MIMAT0033030
• Description: Pristionchus pacificus ppc-miR-8364c-5p mature miRNA
• Sequence: 1 - UCUUCAUUUCACAUACUCUCU - 21
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8364c-2-3p

• Accession: MIMAT0033031
• Description: Pristionchus pacificus ppc-miR-8364c-2-3p mature miRNA
• Sequence: 40 - GAGAGUCUGUGAAAUGAAGAGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260