Stem-loop ppc-mir-8272

Accession

MI0026949

Description

Pristionchus pacificus ppc-mir-8272 precursor miRNA

Sequence

UGUCUGAUUGGUCUUGGUACUGCaaugauugaauaugUAGUAGCAAAUCUAACAGGCGCA
.(((((.((((..(((.(((((((((......)).))))))).)))..)))))))))...

Structure

--U     A    UC   G       -  ga 
   GUCUG UUGG  UUG UACUGCa au  u
   ||||| ||||  ||| ||||||| ||   
   CGGAC AAUC  AAC AUGAUgu ua  u
ACG     -    UA   G       a  ag 

Annotation confidence Low

Genome context

Unknown

Mature ppc-miR-8272-5p

• Accession: MIMAT0033041
• Description: Pristionchus pacificus ppc-miR-8272-5p mature miRNA
• Sequence: 1 - UGUCUGAUUGGUCUUGGUACUGC - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8272-3p

• Accession: MIMAT0033042
• Description: Pristionchus pacificus ppc-miR-8272-3p mature miRNA
• Sequence: 38 - UAGUAGCAAAUCUAACAGGCGCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260