Stem-loop ppc-mir-8273

Accession

MI0026950

Description

Pristionchus pacificus ppc-mir-8273 precursor miRNA

Sequence

GUACGGUAGUGCCACUCAAAACCaucgauuauugauuaucgagaUUUUGAAUGACUCUCCGUACAG
((((((.((.(.((.((((((.(.(((((........)))))).)))))).)).).))))))))..

Structure

--      U  U C  C      C a     uau 
  GUACGG AG G CA UCAAAA C ucgau   u
  |||||| || | || |||||| | |||||    
  CAUGCC UC C GU AGUUUU g agcua   g
GA      -  U A  A      a -     uua 

Annotation confidence Not enough data

Genome context

ABKE03000107.1: 832856-832921 [-]

Mature ppc-miR-8273-5p

• Accession: MIMAT0033043
• Description: Pristionchus pacificus ppc-miR-8273-5p mature miRNA
• Sequence: 1 - GUACGGUAGUGCCACUCAAAACC - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8273-3p

• Accession: MIMAT0033044
• Description: Pristionchus pacificus ppc-miR-8273-3p mature miRNA
• Sequence: 45 - UUUUGAAUGACUCUCCGUACAG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260