Stem-loop ppc-mir-8364n

Accession

MI0026951

Description

Pristionchus pacificus ppc-mir-8364n precursor miRNA

Sequence

UCUUCAUUCCACAUGCUUUCUCAgccaaucaagcagacgaGAUAGCGUAUGGAAUGAAGAGA
(((((((((((.(((((.((((.((.......))....)))).))))).)))))))))))..

Structure

--           C     U    ---A  ca 
  UCUUCAUUCCA AUGCU UCUC    gc  a
  ||||||||||| ||||| ||||    ||  u
  AGAAGUAAGGU UGCGA AGag    cg  c
AG           A     U    caga  aa 

Annotation confidence Low

Genome context

ABKE03000122.1: 632770-632831 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ppc-mir-8364n

Mature ppc-miR-8364n-5p

• Accession: MIMAT0033045
• Description: Pristionchus pacificus ppc-miR-8364n-5p mature miRNA
• Sequence: 1 - UCUUCAUUCCACAUGCUUUCUCA - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8364n-3p

• Accession: MIMAT0033046
• Description: Pristionchus pacificus ppc-miR-8364n-3p mature miRNA
• Sequence: 41 - GAUAGCGUAUGGAAUGAAGAGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260