Stem-loop ppc-mir-8276

Accession

MI0026954

Description

Pristionchus pacificus ppc-mir-8276 precursor miRNA

Sequence

AUUGGCACUCUUUUUCUUUUUGaaaaauaaaagaauuuaAAAAGAAAAAGAAGUGCUAAUCC
((((((((((((((((((((((((...........))))))))))))))).)))))))))..

Structure

--         -               aaau 
  AUUGGCACU CUUUUUCUUUUUGaa    a
  ||||||||| |||||||||||||||    a
  UAAUCGUGA GAAAAAGAAAAauuu    a
CC         A               aaga 

Annotation confidence Low

Genome context

ABKE03000076.1: 268175-268236 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppc-mir-8276

Mature ppc-miR-8276-5p

• Accession: MIMAT0033051
• Description: Pristionchus pacificus ppc-miR-8276-5p mature miRNA
• Sequence: 1 - AUUGGCACUCUUUUUCUUUUUG - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8276-3p

• Accession: MIMAT0033052
• Description: Pristionchus pacificus ppc-miR-8276-3p mature miRNA
• Sequence: 40 - AAAAGAAAAAGAAGUGCUAAUCC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260