Stem-loop ppc-mir-8277

Accession

MI0026955

Description

Pristionchus pacificus ppc-mir-8277 precursor miRNA

Sequence

AACGGUGAGGUGCGAUGCAACGgcaagcgagaccgUCGCUUUGCACCUCAACGUUAGC
((((.((((((((((.((.(((((......).)))).)).)))))))))).))))...

Structure

---    G          U  A    - aa 
   AACG UGAGGUGCGA GC ACGg c  g
   |||| |||||||||| || |||| |   
   UUGC ACUCCACGUU CG Ugcc g  c
CGA    A          U  C    a ag 

Annotation confidence Low

Genome context

ABKE03000063.1: 2372686-2372743 [+]

Mature ppc-miR-8277-5p

• Accession: MIMAT0033053
• Description: Pristionchus pacificus ppc-miR-8277-5p mature miRNA
• Sequence: 1 - AACGGUGAGGUGCGAUGCAACG - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8277-3p

• Accession: MIMAT0033054
• Description: Pristionchus pacificus ppc-miR-8277-3p mature miRNA
• Sequence: 36 - UCGCUUUGCACCUCAACGUUAGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260