Stem-loop ppc-mir-8287

Accession

MI0026970

Description

Pristionchus pacificus ppc-mir-8287 precursor miRNA

Sequence

ACUUCACAAGUGUAUUUCUACCGuagccuuuccagguacggUAGAAAUACACUUGUGAACACU
..(((((((((((((((((((((((.(((....))))))))))))))))))))))))))....

Structure

--AC                       g   u 
    UUCACAAGUGUAUUUCUACCGua ccu u
    ||||||||||||||||||||||| |||  
    AAGUGUUCACAUAAAGAUggcau gga c
UCAC                       -   c 

Annotation confidence Low

Genome context

ABKE03000093.1: 7818985-7819047 [-]

Mature ppc-miR-8287-5p

• Accession: MIMAT0033083
• Description: Pristionchus pacificus ppc-miR-8287-5p mature miRNA
• Sequence: 1 - ACUUCACAAGUGUAUUUCUACCG - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8287-3p

• Accession: MIMAT0033084
• Description: Pristionchus pacificus ppc-miR-8287-3p mature miRNA
• Sequence: 42 - UAGAAAUACACUUGUGAACACU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260