Accession
MI0026971
Description
Pristionchus pacificus
ppc-mir-8288 precursor miRNA
Sequence
124
reads,
10.0
reads per million, 8 experiments
GCAUGGAACGUAUCGAUUCACCGUauacuugaaugaacggUGAAAGACACAUUCCAUGGGCag
.(((((((.((.((..((((((((............)))))))).)).)).))))))).....
.(((((((.((.((..((((((((............)))))))).)).)).))))))).....
Structure
----G C A GA auacu
CAUGGAA GU UC UUCACCGU u
||||||| || || ||||||||
GUACCUU CA AG AAGUggca g
gaCGG A C -A aguaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ABKE03000003.1: 124844-124906 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from ppc-mir-8288
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-8288-5p
| Accession | MIMAT0033085 |
| Description | Pristionchus pacificus ppc-miR-8288-5p mature miRNA |
| Sequence | 1 - GCAUGGAACGUAUCGAUUCACCGU - 24 |
| Evidence |
experimental
SOLiD [1] |
Mature ppc-miR-8288-3p
| Accession | MIMAT0033086 |
| Description | Pristionchus pacificus ppc-miR-8288-3p mature miRNA |
| Sequence | 41 - UGAAAGACACAUUCCAUGGGC - 61 |
| Evidence |
experimental
SOLiD [1] |
References
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