Stem-loop ppc-mir-76

Accession

MI0026972

Description

Pristionchus pacificus ppc-mir-76 precursor miRNA

Sequence

197 reads, 23.0 reads per million, 12 experiments

AUGACUUUCCACUCAGCGAAUAUuacauacaauucauaUUCGUUGUUUGCGAAAUUCAUGc
((((.((((((..((((((((((............))))))))))..)).)))).))))..

Structure

--    C    -  CU          uacau 
  AUGA UUUC CA  CAGCGAAUAU     a
  |||| |||| ||  ||||||||||      
  UACU AAAG GU  GUUGCUUaua     c
cG    U    C  UU          cuuaa 

Annotation confidence High

Genome context

ABKE03000023.1: 274526-274586 [-]

Mature ppc-miR-76-5p

• Accession: MIMAT0033087
• Description: Pristionchus pacificus ppc-miR-76-5p mature miRNA
• Sequence: 1 - AUGACUUUCCACUCAGCGAAUAU - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-76-3p

• Accession: MIMAT0033088
• Description: Pristionchus pacificus ppc-miR-76-3p mature miRNA
• Sequence: 39 - UUCGUUGUUUGCGAAAUUCAUG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260