Stem-loop ppc-mir-8317a

Accession

MI0026973

Description

Pristionchus pacificus ppc-mir-8317a precursor miRNA

Sequence

AUGGGCUUUCCGAGACUAUUCGAgaauguacgaauuCGAAUAUCUCGCUAAGUCUGAGA
..((((((..(((((.((((((((..........)))))))))))))..))))))....

Structure

--AU      UC     C        aaug 
    GGGCUU  CGAGA UAUUCGAg    u
    ||||||  ||||| ||||||||     
    UCUGAA  GCUCU AUAAGCuu    a
AGAG      UC     -        aagc 

Annotation confidence Low

Genome context

ABKE03000073.1: 33133-33191 [-]

Mature ppc-miR-8317a-5p

• Accession: MIMAT0033089
• Description: Pristionchus pacificus ppc-miR-8317a-5p mature miRNA
• Sequence: 1 - AUGGGCUUUCCGAGACUAUUCGA - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8317a-3p

• Accession: MIMAT0033090
• Description: Pristionchus pacificus ppc-miR-8317a-3p mature miRNA
• Sequence: 37 - CGAAUAUCUCGCUAAGUCUGAGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260