Stem-loop ppc-mir-8291

Accession

MI0026977

Description

Pristionchus pacificus ppc-mir-8291 precursor miRNA

Sequence

CAUGGGAUUAUGGAGUGUAUUCGcgauaagaauagccAAUAUCUCUAUCAAUCCUGAGGA
(.(((((((((((((.(((((.((..........)).))))))))))).))))))).)..

Structure

-- A       -      U     C  gaua 
  C UGGGAUU AUGGAG GUAUU Gc    a
  | ||||||| |||||| ||||| ||     
  G GUCCUAA UAUCUC UAUAA cg    g
AG A       C      -     c  auaa 

Annotation confidence Low

Genome context

ABKE03000038.1: 1079065-1079124 [+]

Mature ppc-miR-8291-5p

• Accession: MIMAT0033095
• Description: Pristionchus pacificus ppc-miR-8291-5p mature miRNA
• Sequence: 1 - CAUGGGAUUAUGGAGUGUAUUCG - 23
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8291-3p

• Accession: MIMAT0033096
• Description: Pristionchus pacificus ppc-miR-8291-3p mature miRNA
• Sequence: 38 - AAUAUCUCUAUCAAUCCUGAGGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260