Stem-loop ppc-mir-8294

Accession

MI0026980

Description

Pristionchus pacificus ppc-mir-8294 precursor miRNA

Sequence

GCCGGCUCUGAUUGGUACUACAACUagaugcucuagUUAGUAACGAUCAGGGCGGUAGC
((((.(((((((((.(((((..((((((...))))))))))).)))))))))))))...

Structure

---    G         G     CA      u 
   GCCG CUCUGAUUG UACUA  ACUaga  
   |||| ||||||||| |||||  |||||| g
   UGGC GGGACUAGC AUGAU  Ugaucu  
CGA    -         A     --      c 

Annotation confidence Low

Genome context

ABKE03000048.1: 242162-242220 [+]

Mature ppc-miR-8294-5p

• Accession: MIMAT0033101
• Description: Pristionchus pacificus ppc-miR-8294-5p mature miRNA
• Sequence: 1 - GCCGGCUCUGAUUGGUACUACAACU - 25
• Evidence: experimental ; SOLiD [1]

Mature ppc-miR-8294-3p

• Accession: MIMAT0033102
• Description: Pristionchus pacificus ppc-miR-8294-3p mature miRNA
• Sequence: 37 - UUAGUAACGAUCAGGGCGGUAGC - 59
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260