Stem-loop ppc-mir-8302

Accession

MI0026992

Description

Pristionchus pacificus ppc-mir-8302 precursor miRNA

Sequence

CCGUUGCCUUUUAUCGUUUCUAUCacugaugaucgugaUAAGCGAUGAGAGACAAUGAUA
.(((((.(((((((((((..((((((........))))))))))))))))).)))))...

Structure

--C     C           UC      uga 
   CGUUG CUUUUAUCGUU  UAUCac   u
   ||||| |||||||||||  ||||||    
   GUAAC GAGAGUAGCGA  AUagug   g
AUA     A           --      cua 

Annotation confidence Not enough data

Genome context

ABKE03000028.1: 1975763-1975822 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ppc-mir-8302

Mature ppc-miR-8302-5p

• Accession: MIMAT0033125
• Description: Pristionchus pacificus ppc-miR-8302-5p mature miRNA
• Sequence: 1 - CCGUUGCCUUUUAUCGUUUCUAUC - 24
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8302-3p

• Accession: MIMAT0033126
• Description: Pristionchus pacificus ppc-miR-8302-3p mature miRNA
• Sequence: 39 - UAAGCGAUGAGAGACAAUGAUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260