Stem-loop ppc-mir-8306

Accession

MI0026998

Description

Pristionchus pacificus ppc-mir-8306 precursor miRNA

Sequence

CGUCUCUUCAUUCUCUCUCGGCcggucgagugcUGCGAGAGUGCUUGAAGAGACGGC
((((((((((..(((((.(((((......).)))).)))))....))))))))))..

Structure

--          --UU     U    - gg 
  CGUCUCUUCA    CUCUC CGGC c  u
  ||||||||||    ||||| |||| |   
  GCAGAGAAGU    GAGAG GUcg g  c
CG          UCGU     C    u ag 

Annotation confidence Low

Genome context

ABKE03000124.1: 1206862-1206918 [+]

Mature ppc-miR-8306-5p

• Accession: MIMAT0033136
• Description: Pristionchus pacificus ppc-miR-8306-5p mature miRNA
• Sequence: 1 - CGUCUCUUCAUUCUCUCUCGGC - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8306-3p

• Accession: MIMAT0033137
• Description: Pristionchus pacificus ppc-miR-8306-3p mature miRNA
• Sequence: 34 - UGCGAGAGUGCUUGAAGAGACGGC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260