Stem-loop ppc-mir-8364o

Accession

MI0026999

Description

Pristionchus pacificus ppc-mir-8364o precursor miRNA

Sequence

CCAUUUCGCGCACUCUCUCACCggucagagaggCGAGAGAGCUCGGGAAAUGAAG
.((((((.((..(((((((.((.........)).)))))))..)).))))))...

Structure

--C      G  CA       A  ggu 
   CAUUUC CG  CUCUCUC CC   c
   |||||| ||  ||||||| ||   a
   GUAAAG GC  GAGAGAG gg   g
GAA      G  UC       C  aga 

Annotation confidence Not enough data

Genome context

ABKE03000104.1: 817608-817662 [-]

Mature ppc-miR-8364o-5p

• Accession: MIMAT0033138
• Description: Pristionchus pacificus ppc-miR-8364o-5p mature miRNA
• Sequence: 1 - CCAUUUCGCGCACUCUCUCACC - 22
• Evidence: experimental ; Illumina [1]

Mature ppc-miR-8364o-3p

• Accession: MIMAT0033139
• Description: Pristionchus pacificus ppc-miR-8364o-3p mature miRNA
• Sequence: 34 - CGAGAGAGCUCGGGAAAUGAAG - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260